ACCALL - Accessibility calculations
 PDB FILE INPUT 1A2KC.pdb
 PROBE SIZE       1.40
 Z-SLICE WIDTH   0.050
 VDW RADII FILE /home/haddock/naccess/vdw.radii
 EXCL HETATOMS
 EXCL HYDROGENS
 EXCL WATERS
 READVDW  32 residues input
 UNKNOWN residue type.............> GDP C 220 
 NON-STANDARD atom.| PB | in residue> GDP C 220 
 GUESSED vdw of  PB  in GDP C 220  =  1.90
 NON-STANDARD atom.| O1B| in residue> GDP C 220 
 GUESSED vdw of  O1B in GDP C 220  =  1.40
 NON-STANDARD atom.| O2B| in residue> GDP C 220 
 GUESSED vdw of  O2B in GDP C 220  =  1.40
 NON-STANDARD atom.| O3B| in residue> GDP C 220 
 GUESSED vdw of  O3B in GDP C 220  =  1.40
 NON-STANDARD atom.| O3A| in residue> GDP C 220 
 GUESSED vdw of  O3A in GDP C 220  =  1.40
 NON-STANDARD atom.| PA | in residue> GDP C 220 
 GUESSED vdw of  PA  in GDP C 220  =  1.90
 NON-STANDARD atom.| O1A| in residue> GDP C 220 
 ASSUMED vdw of  O1A in GDP C 220  =  1.35 (same as HEM)
 NON-STANDARD atom.| O2A| in residue> GDP C 220 
 ASSUMED vdw of  O2A in GDP C 220  =  1.35 (same as HEM)
 NON-STANDARD atom.| O5*| in residue> GDP C 220 
 ASSUMED vdw of  O5* in GDP C 220  =  1.40 (same as   A)
 NON-STANDARD atom.| C5*| in residue> GDP C 220 
 ASSUMED vdw of  C5* in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| C4*| in residue> GDP C 220 
 ASSUMED vdw of  C4* in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| O4*| in residue> GDP C 220 
 ASSUMED vdw of  O4* in GDP C 220  =  1.40 (same as   A)
 NON-STANDARD atom.| C3*| in residue> GDP C 220 
 ASSUMED vdw of  C3* in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| O3*| in residue> GDP C 220 
 ASSUMED vdw of  O3* in GDP C 220  =  1.40 (same as   A)
 NON-STANDARD atom.| C2*| in residue> GDP C 220 
 ASSUMED vdw of  C2* in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| O2*| in residue> GDP C 220 
 ASSUMED vdw of  O2* in GDP C 220  =  1.40 (same as   U)
 NON-STANDARD atom.| C1*| in residue> GDP C 220 
 ASSUMED vdw of  C1* in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| N9 | in residue> GDP C 220 
 ASSUMED vdw of  N9  in GDP C 220  =  1.60 (same as   A)
 NON-STANDARD atom.| C8 | in residue> GDP C 220 
 ASSUMED vdw of  C8  in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| N7 | in residue> GDP C 220 
 ASSUMED vdw of  N7  in GDP C 220  =  1.60 (same as   A)
 NON-STANDARD atom.| C5 | in residue> GDP C 220 
 ASSUMED vdw of  C5  in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| C6 | in residue> GDP C 220 
 ASSUMED vdw of  C6  in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| O6 | in residue> GDP C 220 
 ASSUMED vdw of  O6  in GDP C 220  =  1.40 (same as   G)
 NON-STANDARD atom.| N1 | in residue> GDP C 220 
 ASSUMED vdw of  N1  in GDP C 220  =  1.60 (same as   A)
 NON-STANDARD atom.| C2 | in residue> GDP C 220 
 ASSUMED vdw of  C2  in GDP C 220  =  1.80 (same as   A)
 NON-STANDARD atom.| N2 | in residue> GDP C 220 
 ASSUMED vdw of  N2  in GDP C 220  =  1.60 (same as   G)
 NON-STANDARD atom.| N3 | in residue> GDP C 220 
 ASSUMED vdw of  N3  in GDP C 220  =  1.60 (same as   A)
 NON-STANDARD atom.| C4 | in residue> GDP C 220 
 ASSUMED vdw of  C4  in GDP C 220  =  1.80 (same as   A)
 ADDED VDW RADII
 CHAINS       1
 RESIDUES   203
 ATOMS     1641
 SOLVA: PROGRAM ENDS CORRECTLY
 CALCULATED ATOMIC ACCESSIBILITES
 RELATIVE (STANDARD) ACCESSIBILITIES READFOR  21 AMINO ACIDS
 SUMMED ACCESSIBILITIES OVER RESIDUES